Transcript: lnc-MPP2-1:2

Basic information

LNCipedia transcript ID: lnc-MPP2-1:2 
LNCipedia gene ID: lnc-MPP2-1
Ensembl Gene ID: ENSG00000282199
Ensembl Transcript ID: ENST00000591374
Location (hg19): chr17:41991801-41994767
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 445 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053881; ENST00000591374.1; ENST00000591374.5
Alternative gene names: ENSG00000267166.1; RP11-527L4.5; ENSG00000282199.1; AC007993.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.8062 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPP2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MPP2-1:2
4.0 lnc-MPP2-1:2
4.1 lnc-MPP2-1:2
5.0 lnc-MPP2-1:2
5.1 lnc-GPATCH8-23:2
5.2 lnc-MPP2-1:2