Transcript: lnc-MPPE1-3:2

Basic information

LNCipedia transcript ID: lnc-MPPE1-3:2 
LNCipedia gene ID: lnc-MPPE1-3
Location (hg19): chr18:12101996-12102469
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 474 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT058342
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.6075 non-coding 
CPAT coding probability 10.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPPE1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP002414.1.1-3:1
4.0 lnc-AP002414.1.1-3:1
4.1 lnc-AP002414.1.1-3:1
5.0 lnc-AP002414.1.1-3:1
5.1 lnc-SMAD2-267:1
5.2 lnc-MPPE1-3:2