Transcript: lnc-MRAP2-1:1

Basic information

LNCipedia transcript ID: lnc-MRAP2-1:1 
LNCipedia gene ID: lnc-MRAP2-1
Ensembl Gene ID: ENSG00000230852
Ensembl Transcript ID: ENST00000444796
Location (hg19): chr6:84732774-84734272
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 340 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011336; ENST00000444796; ENST00000444796.1; RP11-51G5.1-001; OTTHUMT00000041366.1; NONHSAT113805
Alternative gene names: XLOC_005372; linc-MRAP2-1; ENSG00000230852; RP11-51G5.1; ENSG00000230852.1; OTTHUMG00000015120.1; AL161621.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.1299 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRAP2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRAP2-1:1
3.1 lnc-MRAP2-1:1
4.0 lnc-MRAP2-1:1
4.1 lnc-MRAP2-1:1
5.0 lnc-MRAP2-1:1
5.1 lnc-CYB5R4-6:1
5.2 lnc-MRAP2-1:1