Transcript: lnc-MRM1-7:1

Basic information

LNCipedia transcript ID: lnc-MRM1-7:1 
LNCipedia gene ID: lnc-MRM1-7
Ensembl Gene ID: ENSG00000276508
Ensembl Transcript ID: ENST00000616810
Location (hg19): chr17:35041203-35041578
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 376 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053237; ENST00000587054.1; ENST00000616810.1
Alternative gene names: ENSG00000267499.1; CTD-3194G12.1; ENSG00000276508.1; AC243830.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.5933 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRM1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRM1-7:1
4.0 lnc-MRM1-7:1
4.1 lnc-MRM1-7:1
5.0 lnc-MRM1-7:1
5.1 lnc-RPL19-54:1
5.2 lnc-MRM1-7:1