Transcript: lnc-MRPL16-1:1

Basic information

LNCipedia transcript ID: lnc-MRPL16-1:1 
LNCipedia gene ID: lnc-MRPL16-1
Location (hg19): chr11:59561584-59562189
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 564 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000533323.1; AP000640.8-001; OTTHUMT00000394520.1; NONHSAT021544
Alternative gene names: ENSG00000255453.1; AP000640.8; OTTHUMG00000167409.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.4964 non-coding 
CPAT coding probability 10.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL16-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL16-1:1
4.0 lnc-MRPL16-1:1
4.1 lnc-MRPL16-1:1
5.0 lnc-MRPL16-1:1
5.1 lnc-OR5M11-45:1
5.2 lnc-MRPL16-1:1