Transcript: lnc-MRPL19-2:1

Basic information

LNCipedia transcript ID: lnc-MRPL19-2:1 
LNCipedia gene ID: lnc-MRPL19-2
Ensembl Gene ID: ENSG00000237293
Ensembl Transcript ID: ENST00000444852
Location (hg19): chr2:75701579-75709705
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 336 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00002939; ENST00000444852.1; AC007099.2-001; OTTHUMT00000328703.1; NONHSAT071799
Alternative gene names: XLOC_001540; linc-MRPL19-1; ENSG00000237293.1; AC007099.2; OTTHUMG00000152939.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -525.9155 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL19-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRPL19-2:1
3.1 lnc-MRPL19-2:1
4.0 lnc-MRPL19-2:1
4.1 lnc-MRPL19-2:1
5.0 lnc-MRPL19-2:1
5.1 lnc-POLE4-26:1
5.2 lnc-MRPL19-2:1