Transcript: lnc-MRPL3-2:8

Basic information

LNCipedia transcript ID: lnc-MRPL3-2:8 
LNCipedia gene ID: lnc-MRPL3-2
Location (hg19): chr3:131047217-131080461
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 266 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250608.1|ENST00000513905.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.4645 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL3-2:8 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRPL3-2:8
5.0 lnc-MRPL3-2:8
5.1 lnc-H1FX-26:7
5.2 lnc-MRPL3-2:8