Transcript: lnc-MRPS23-1:3

Basic information

LNCipedia transcript ID: lnc-MRPS23-1:3 
LNCipedia gene ID: lnc-MRPS23-1
Location (hg19): chr17:55849169-55912101
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 634 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054900
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.829 non-coding 
CPAT coding probability 24.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPS23-1:3 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPS23-1:3
4.0 lnc-MRPS23-1:3
4.1 lnc-MRPS23-1:3
5.0 lnc-MRPS23-1:3
5.1 lnc-PTRH2-38:5
5.2 lnc-MRPS23-1:3