Transcript: lnc-MRPS27-1:3

Basic information

LNCipedia transcript ID: lnc-MRPS27-1:3 
LNCipedia gene ID: lnc-MRPS27-1
Location (hg19): chr5:71398821-71403117
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4297 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT102043
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.1329 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPS27-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPS27-1:3
4.0 lnc-MRPS27-1:3
4.1 lnc-MRPS27-1:3
5.0 lnc-MRPS27-1:3
5.1 lnc-TRIM23-82:2
5.2 lnc-MRPS27-1:3