Transcript: lnc-MRTO4-1:2

Basic information

LNCipedia transcript ID: lnc-MRTO4-1:2 
LNCipedia gene ID: lnc-MRTO4-1
Location (hg19): chr1:19536769-19540151
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 321 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT001280
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -292.1137 non-coding 
CPAT coding probability 8.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRTO4-1:2 yes no no no

Available literature

  1. Zhou (2015), Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma., J. Exp. Clin. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRTO4-1:2
4.0 lnc-MRTO4-1:2
4.1 lnc-MRTO4-1:2
5.0 lnc-MRTO4-1:2
5.1 lnc-NBPF3-40:1
5.2 lnc-MRTO4-1:2