Transcript: lnc-MRTO4-1:3

Basic information

LNCipedia transcript ID: lnc-MRTO4-1:3 
LNCipedia gene ID: lnc-MRTO4-1
Location (hg19): chr1:19536889-19540207
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3319 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT001281
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.8725 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRTO4-1:3 no no no no

Available literature

  1. Zhou (2015), Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma., J. Exp. Clin. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRTO4-1:3
4.0 lnc-MRTO4-1:3
4.1 lnc-MRTO4-1:3
5.0 lnc-MRTO4-1:3
5.1 lnc-NBPF3-40:6
5.2 lnc-MRTO4-1:3