Transcript: lnc-MS4A8-17:1

Basic information

LNCipedia transcript ID: lnc-MS4A8-17:1 
LNCipedia gene ID: lnc-MS4A8-17
Location (hg19): chr11:60383206-60454622
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1014 bp
Exons: 8
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019308; NONHSAT021577
Alternative gene names: XLOC_009142; linc-MS4A8B; MGC39681


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.3641 non-coding 
CPAT coding probability 4.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MS4A8-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MS4A8B-1:1
3.1 lnc-MS4A8B-1:1
4.0 LINC00301:1
4.1 LINC00301:1
5.0 LINC00301:1
5.1 lnc-MS4A8-1:1
5.2 lnc-MS4A8-17:1