Transcript: lnc-MSGN1-4:1

Basic information

LNCipedia transcript ID: lnc-MSGN1-4:1 
LNCipedia gene ID: lnc-MSGN1-4
Location (hg19): chr2:18479049-18491768
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2076 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT069364
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.2578 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MSGN1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MSGN1-4:1
4.0 lnc-MSGN1-4:1
4.1 lnc-MSGN1-4:1
5.0 lnc-MSGN1-4:1
5.1 lnc-SNX17-117:1
5.2 lnc-MSGN1-4:1