Transcript: lnc-MTERF1-1:1

Basic information

LNCipedia transcript ID: lnc-MTERF1-1:1 
LNCipedia gene ID: lnc-MTERF1-1
Location (hg19): chr7:91321323-91510004
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 380 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000454222.1; CTB-104F4.2-001; OTTHUMT00000342903.1; NONHSAT121946
Alternative gene names: ENSG00000242870.1; CTB-104F4.2; OTTHUMG00000156058.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -180.3892 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTERF1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTERF-1:1
4.0 lnc-MTERF-1:1
4.1 lnc-MTERF-1:1
5.0 lnc-MTERF-1:1
5.1 lnc-PEX1-16:1
5.2 lnc-MTERF1-1:1