Transcript: lnc-MTERF4-2:1

Basic information

LNCipedia transcript ID: lnc-MTERF4-2:1 
LNCipedia gene ID: lnc-MTERF4-2
Ensembl Gene ID: ENSG00000229996
Ensembl Transcript ID: ENST00000425183
Location (hg19): chr2:241949462-241950161
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 428 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425183.1; AC093585.6-001; OTTHUMT00000324084.1; NONHSAT077871
Alternative gene names: ENSG00000229996.1; AC093585.6; OTTHUMG00000151830.1; AC093585.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -397.2294 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTERF4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTERFD2-2:1
4.0 lnc-MTERFD2-2:1
4.1 lnc-MTERFD2-2:1
5.0 lnc-MTERFD2-2:1
5.1 lnc-STK25-17:1
5.2 lnc-MTERF4-2:1