Transcript: lnc-MTG2-1:1

Basic information

LNCipedia transcript ID: lnc-MTG2-1:1 
LNCipedia gene ID: lnc-MTG2-1
Location (hg19): chr20:60807016-60811355
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3210 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027874; NONHSAT080718
Alternative gene names: XLOC_013597; linc-OSBPL2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.0078 non-coding 
CPAT coding probability 86.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTG2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL078633.1-1:1
3.1 lnc-AL078633.1-1:1
4.0 lnc-AL078633.1-1:1
4.1 lnc-AL078633.1-1:1
5.0 lnc-AL078633.1-1:1
5.1 lnc-GNAS-34:1
5.2 lnc-MTG2-1:1