Transcript: lnc-MTR-1:5

Basic information

LNCipedia transcript ID: lnc-MTR-1:5 
LNCipedia gene ID: lnc-MTR-1
Location (hg19): chr1:237070071-237072046
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1976 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT010428; FPKM1_group_2640_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.3434 non-coding 
CPAT coding probability 2.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTR-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTR-1:5
4.0 lnc-MTR-1:5
4.1 lnc-MTR-1:5
5.0 lnc-MTR-1:5
5.1 lnc-RYR2-1:3
5.2 lnc-MTR-1:5