Transcript: lnc-MTX2-6:1

Basic information

LNCipedia transcript ID: lnc-MTX2-6:1 
LNCipedia gene ID: lnc-MTX2-6
Location (hg19): chr2:177362438-177454492
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2035 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT075654; FPKM1_group_17701_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.3131 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTX2-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTX2-6:1
4.0 lnc-MTX2-6:1
4.1 lnc-MTX2-6:1
5.0 lnc-MTX2-6:1
5.1 lnc-UBR3-79:4
5.2 lnc-MTX2-6:1