Transcript: lnc-MUTYH-1:2

Basic information

LNCipedia transcript ID: lnc-MUTYH-1:2 
LNCipedia gene ID: lnc-MUTYH-1
Location (hg19): chr1:45762366-45771260
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1112 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001482; NONHSAT002924
Alternative gene names: XLOC_000816; linc-ZSWIM5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3521 non-coding 
CPAT coding probability 7.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUTYH-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MUTYH-1:2
3.1 lnc-MUTYH-1:2
4.0 lnc-MUTYH-1:2
4.1 lnc-MUTYH-1:2
5.0 lnc-MUTYH-1:2
5.1 lnc-PRDX1-14:2
5.2 lnc-MUTYH-1:2