Transcript: lnc-MVP-3:15

Basic information

LNCipedia transcript ID: lnc-MVP-3:15 
LNCipedia gene ID: lnc-MVP-3
RefSeq ID: NR_015396
Location (hg19): chr16:29875155-29879374
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 762 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT141661; NR_015396; NR_015396.1
Alternative gene names: ; CDIPT-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 90.2553 coding 
CPAT coding probability 8.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MVP-3:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MVP-1:4
4.0 CDIPT-AS1:5
4.1 CDIPT-AS1:5
5.0 CDIPT-AS1:5
5.1 lnc-PRRT2-8:26
5.2 lnc-MVP-3:15