Transcript: lnc-MYBPC1-3:4

Basic information

LNCipedia transcript ID: lnc-MYBPC1-3:4 
LNCipedia gene ID: lnc-MYBPC1-3
Location (hg19): chr12:102069734-102086459
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1588 bp
Exons: 9
Sources: Nielsen et al.,2014
Alternative transcript names: l_714_chr12:102069733-102081535_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.0408 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYBPC1-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHPT1-3:4
4.0 lnc-MYBPC1-3:4
4.1 lnc-MYBPC1-3:4
5.0 lnc-MYBPC1-3:4
5.1 lnc-MYBPC1-3:4
5.2 lnc-MYBPC1-3:4