Transcript: lnc-NAA35-17:1

Basic information

LNCipedia transcript ID: lnc-NAA35-17:1 
LNCipedia gene ID: lnc-NAA35-17
Location (hg19): chr9:89366554-89370049
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 232 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016040; NONHSAT132839
Alternative gene names: XLOC_007437; linc-C9orf170-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -249.9632 non-coding 
CPAT coding probability 5.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAA35-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C9orf170-2:1
3.1 lnc-C9orf170-2:1
4.0 lnc-C9orf170-2:1
4.1 lnc-C9orf170-2:1
5.0 lnc-C9orf170-2:1
5.1 lnc-SECISBP2-47:1
5.2 lnc-NAA35-17:1