Transcript: lnc-NAA40-1:1

Basic information

LNCipedia transcript ID: lnc-NAA40-1:1 
LNCipedia gene ID: lnc-NAA40-1
Location (hg19): chr11:63731705-63732064
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 360 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr11_5479_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4672 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAA40-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAA40-1:1
4.0 lnc-NAA40-1:1
4.1 lnc-NAA40-1:1
5.0 lnc-NAA40-1:1
5.1 lnc-PPP2R5B-72:1
5.2 lnc-NAA40-1:1