Transcript: lnc-NAALADL2-15:1

Basic information

LNCipedia transcript ID: lnc-NAALADL2-15:1 
LNCipedia gene ID: lnc-NAALADL2-15
Location (hg19): chr3:176262494-176276728
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 551 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007042; NONHSAT093317
Alternative gene names: XLOC_002926; linc-KCNMB2-10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.0168 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAALADL2-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NAALADL2-1:1
3.1 lnc-NAALADL2-1:1
4.0 lnc-NAALADL2-15:1
4.1 lnc-NAALADL2-15:1
5.0 lnc-NAALADL2-15:1
5.1 lnc-NAALADL2-15:1
5.2 lnc-NAALADL2-15:1