Transcript: lnc-NAALADL2-1:4

Basic information

LNCipedia transcript ID: lnc-NAALADL2-1:4 
LNCipedia gene ID: lnc-NAALADL2-1
Location (hg19): chr3:174156363-174455534
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 358 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00005438
Alternative gene names: XLOC_002925; linc-NAALADL2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.939 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAALADL2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NLGN1-1:1
3.1 lnc-NLGN1-1:1
4.0 lnc-NAALADL2-1:4
4.1 lnc-NAALADL2-1:4
5.0 lnc-NAALADL2-1:4
5.1 lnc-NAALADL2-1:4
5.2 lnc-NAALADL2-1:4