Transcript: lnc-NABP1-5:1

Basic information

LNCipedia transcript ID: lnc-NABP1-5:1 
LNCipedia gene ID: lnc-NABP1-5
Location (hg19): chr2:192787272-192895368
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000428980.1; AC098617.1-001; OTTHUMT00000334858.1
Alternative gene names: ENSG00000232452.1; AC098617.1; OTTHUMG00000154332.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 72.7039 coding 
CPAT coding probability 11.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NABP1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OBFC2A-4:1
4.0 lnc-OBFC2A-5:16
4.1 lnc-OBFC2A-5:16
5.0 lnc-OBFC2A-5:16
5.1 lnc-FAM171B-43:8
5.2 lnc-NABP1-5:1