Transcript: lnc-NABP1-5:4

Basic information

LNCipedia transcript ID: lnc-NABP1-5:4 
LNCipedia gene ID: lnc-NABP1-5
Location (hg19): chr2:192787306-192901555
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1173 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233766.3|ENST00000428980.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 72.7039 coding 
CPAT coding probability 7.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NABP1-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OBFC2A-5:30
5.0 lnc-OBFC2A-5:30
5.1 lnc-FAM171B-43:11
5.2 lnc-NABP1-5:4