Transcript: lnc-NABP1-5:9

Basic information

LNCipedia transcript ID: lnc-NABP1-5:9 
LNCipedia gene ID: lnc-NABP1-5
Ensembl Gene ID: ENSG00000233766
Ensembl Transcript ID: ENST00000599681
Location (hg19): chr2:192895331-192901473
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 767 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT076139; ENST00000599681.1; ENST00000599681.5
Alternative gene names: ENSG00000233766.3; AC098617.1; ENSG00000233766.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.2659 non-coding 
CPAT coding probability 9.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NABP1-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OBFC2A-5:7
4.0 lnc-OBFC2A-5:7
4.1 lnc-OBFC2A-5:7
5.0 lnc-OBFC2A-5:7
5.1 lnc-FAM171B-43:16
5.2 lnc-NABP1-5:9