Transcript: lnc-NADSYN1-1:5

Basic information

LNCipedia transcript ID: lnc-NADSYN1-1:5 
LNCipedia gene ID: lnc-NADSYN1-1
Location (hg19): chr11:71159674-71163869
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4196 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254682.1|FTMT24400003358.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.3881 non-coding 
CPAT coding probability 7.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NADSYN1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NADSYN1-1:5
5.0 lnc-NADSYN1-1:5
5.1 lnc-TCIRG1-60:4
5.2 lnc-NADSYN1-1:5