Transcript: lnc-NAT1-3:19

Basic information

LNCipedia transcript ID: lnc-NAT1-3:19 
LNCipedia gene ID: lnc-NAT1-3
Location (hg19): chr8:17942536-17944273
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1738 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245281.2|ENCT00000422578.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -112.9188 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAT1-3:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NAT1-3:19
5.0 lnc-NAT1-3:19
5.1 lnc-PCM1-3:30
5.2 lnc-NAT1-3:19