Transcript: lnc-NAT1-6:1

Basic information

LNCipedia transcript ID: lnc-NAT1-6:1 
LNCipedia gene ID: lnc-NAT1-6
Location (hg19): chr8:17802258-17809798
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 823 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3555_chr8:17802257-17809184_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.2219 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAT1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAT1-6:1
4.0 lnc-NAT1-6:1
4.1 lnc-NAT1-6:1
5.0 lnc-NAT1-6:1
5.1 lnc-SH2D4A-23:1
5.2 lnc-NAT1-6:1