Transcript: lnc-NAV3-5:6

Basic information

LNCipedia transcript ID: lnc-NAV3-5:6 
LNCipedia gene ID: lnc-NAV3-5
Location (hg19): chr12:77511553-77514022
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 222 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020481; NONHSAT029603
Alternative gene names: XLOC_009812; linc-NAV3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAV3-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZDHHC17-2:1
3.1 lnc-ZDHHC17-5:1
4.0 lnc-ZDHHC17-5:1
4.1 lnc-ZDHHC17-5:1
5.0 lnc-ZDHHC17-5:1
5.1 lnc-SYT1-20:1
5.2 lnc-NAV3-5:6