Transcript: lnc-NBPF1-1:7

Basic information

LNCipedia transcript ID: lnc-NBPF1-1:7 
LNCipedia gene ID: lnc-NBPF1-1
Location (hg19): chr1:16969273-16969742
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 293 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT139844
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.7154 non-coding 
CPAT coding probability 61.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NBPF1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST1P9-2:8
4.0 lnc-MST1P9-2:8
4.1 lnc-MST1P9-2:8
5.0 lnc-MST1P9-2:8
5.1 lnc-LRRC38-45:7
5.2 lnc-NBPF1-1:7