Transcript: lnc-NBPF1-4:2

Basic information

LNCipedia transcript ID: lnc-NBPF1-4:2 
LNCipedia gene ID: lnc-NBPF1-4
Location (hg19): chr1:17007545-17017842
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 726 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT001186
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 104.3259 coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NBPF1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST1P9-4:6
4.0 lnc-MST1P9-7:2
4.1 lnc-MST1P9-7:2
5.0 lnc-MST1P9-7:2
5.1 lnc-LRRC38-47:2
5.2 lnc-NBPF1-4:2