Transcript: lnc-NBPF11-1:24

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:24 
LNCipedia gene ID: lnc-NBPF11-1
Location (hg19): chr1:147678874-147718909
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1197 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000074857.1|HBMT00000072619.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 48.4802 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NBPF11-1:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NBPF24-1:23
5.0 lnc-NBPF24-1:23
5.1 lnc-PPIAL4G-29:9
5.2 lnc-NBPF11-1:24