Transcript: lnc-NBPF11-1:32

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:32 
LNCipedia gene ID: lnc-NBPF11-1
Location (hg19): chr1:147717759-147718692
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 563 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000074857.1|FTMT20100091352.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -25.2089 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF11-1:32 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NBPF24-1:26
5.0 lnc-NBPF24-1:26
5.1 lnc-PPIAL4G-29:17
5.2 lnc-NBPF11-1:32