Transcript: lnc-NBPF11-1:33

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:33 
LNCipedia gene ID: lnc-NBPF11-1
Location (hg19): chr1:147668530-147700929
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 756 bp
Exons: 8
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000424741.2
Alternative gene names: ENSG00000226335.2; XXyac-YX155B6.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.276 non-coding 
CPAT coding probability 4.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF11-1:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBPF24-1:2
4.0 lnc-NBPF24-1:2
4.1 lnc-NBPF24-1:2
5.0 lnc-NBPF24-1:2
5.1 lnc-PPIAL4G-29:22
5.2 lnc-NBPF11-1:33