Transcript: lnc-NBPF11-1:42

Basic information

LNCipedia transcript ID: lnc-NBPF11-1:42 
LNCipedia gene ID: lnc-NBPF11-1
Location (hg19): chr1:147638916-147646270
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3540 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT006073
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.6055 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF11-1:42 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBPF24-6:1
4.0 lnc-NBPF24-1:16
4.1 lnc-NBPF24-1:16
5.0 lnc-NBPF24-1:16
5.1 lnc-PPIAL4G-29:42
5.2 lnc-NBPF11-1:42