Transcript: lnc-NBPF20-3:2

Basic information

LNCipedia transcript ID: lnc-NBPF20-3:2 
LNCipedia gene ID: lnc-NBPF20-3
Location (hg19): chr1:144392143-144392429
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 287 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT005791
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.5481 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF20-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIAL4B-3:1
4.0 lnc-PPIAL4B-3:1
4.1 lnc-PPIAL4B-3:1
5.0 lnc-PPIAL4B-3:1
5.1 lnc-FAM72C-20:1
5.2 lnc-NBPF20-3:2