Transcript: lnc-NBPF3-45:1

Basic information

LNCipedia transcript ID: lnc-NBPF3-45:1 
LNCipedia gene ID: lnc-NBPF3-45
Location (hg19): chr1:21615402-21616454
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 605 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT001406
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -199.9877 non-coding 
CPAT coding probability 6.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF3-45:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBPF3-6:2
4.0 lnc-NBPF3-6:2
4.1 lnc-NBPF3-3:4
5.0 lnc-NBPF3-3:4
5.1 lnc-NBPF3-44:1
5.2 lnc-NBPF3-45:1