Transcript: lnc-NBPF3-9:1

Basic information

LNCipedia transcript ID: lnc-NBPF3-9:1 
LNCipedia gene ID: lnc-NBPF3-9
Location (hg19): chr1:21487968-21488574
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 296 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT001396
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.421 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF3-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBPF3-9:1
4.0 lnc-NBPF3-9:1
4.1 lnc-NBPF3-9:1
5.0 lnc-NBPF3-9:1
5.1 lnc-NBPF3-9:1
5.2 lnc-NBPF3-9:1