Transcript: lnc-NBPF9-8:2

Basic information

LNCipedia transcript ID: lnc-NBPF9-8:2 
LNCipedia gene ID: lnc-NBPF9-8
Location (hg19): chr1:144932252-144934475
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015962.1|FTMT20300020326.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -143.3214 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBPF9-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NBPF9-8:2
5.0 lnc-NBPF9-8:2
5.1 lnc-PPIAL4G-37:2
5.2 lnc-NBPF9-8:2