Transcript: lnc-NCALD-1:5

Basic information

LNCipedia transcript ID: lnc-NCALD-1:5 
LNCipedia gene ID: lnc-NCALD-1
Location (hg19): chr8:102503952-102504780
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 690 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254024.1|FTMT22900016995.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.9088 non-coding 
CPAT coding probability 2.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCALD-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NCALD-1:5
5.0 lnc-NCALD-1:5
5.1 lnc-ZNF706-18:4
5.2 lnc-NCALD-1:5