Transcript: lnc-NCOA3-22:2

Basic information

LNCipedia transcript ID: lnc-NCOA3-22:2 
LNCipedia gene ID: lnc-NCOA3-22
Location (hg19): chr20:46012961-46014201
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2124_chr20:46012960-46014201_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.7891 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCOA3-22:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NCOA3-22:2
4.0 lnc-NCOA3-22:2
4.1 lnc-NCOA3-22:2
5.0 lnc-NCOA3-22:2
5.1 lnc-STK4-78:2
5.2 lnc-NCOA3-22:2