Transcript: lnc-NCOA3-29:2

Basic information

LNCipedia transcript ID: lnc-NCOA3-29:2 
LNCipedia gene ID: lnc-NCOA3-29
Location (hg19): chr20:45986642-45988187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1425 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053407.1|MICT00000219037.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.1444 non-coding 
CPAT coding probability 2.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCOA3-29:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NCOA3-29:2
5.0 lnc-NCOA3-29:2
5.1 lnc-STK4-74:2
5.2 lnc-NCOA3-29:2