Transcript: lnc-NCOA3-30:1

Basic information

LNCipedia transcript ID: lnc-NCOA3-30:1 
LNCipedia gene ID: lnc-NCOA3-30
Location (hg19): chr20:46618951-46619609
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 659 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229522.1|ENCT00000262086.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.5064 non-coding 
CPAT coding probability 5.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NCOA3-30:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NCOA3-30:1
5.0 lnc-NCOA3-30:1
5.1 lnc-SNAI1-53:1
5.2 lnc-NCOA3-30:1