Transcript: lnc-NCOA3-5:11

Basic information

LNCipedia transcript ID: lnc-NCOA3-5:11 
LNCipedia gene ID: lnc-NCOA3-5
Location (hg19): chr20:46523133-46525925
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2695 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080107
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 74.6793 coding 
CPAT coding probability 25.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NCOA3-5:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NCOA3-5:11
4.0 lnc-NCOA3-5:11
4.1 lnc-NCOA3-5:11
5.0 lnc-NCOA3-5:11
5.1 lnc-SNAI1-56:11
5.2 lnc-NCOA3-5:11