Transcript: lnc-NDC1-1:2

Basic information

LNCipedia transcript ID: lnc-NDC1-1:2 
LNCipedia gene ID: lnc-NDC1-1
Location (hg19): chr1:54154747-54155857
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 427 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_56_chr1:54154746-54155857_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.642 non-coding 
CPAT coding probability 8.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDC1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM48-1:1
4.0 lnc-TMEM48-1:1
4.1 lnc-TMEM48-1:1
5.0 lnc-TMEM48-1:1
5.1 lnc-NDC1-2:1
5.2 lnc-NDC1-1:2