Transcript: lnc-NDST2-3:4

Basic information

LNCipedia transcript ID: lnc-NDST2-3:4 
LNCipedia gene ID: lnc-NDST2-3
Location (hg19): chr10:75538774-75541711
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2550 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000000155.1|MICT00000044120.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.7446 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDST2-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NDST2-3:4
5.0 lnc-NDST2-3:4
5.1 lnc-VSIR-33:2
5.2 lnc-NDST2-3:4