Transcript: lnc-NDUFB1-1:10

Basic information

LNCipedia transcript ID: lnc-NDUFB1-1:10 
LNCipedia gene ID: lnc-NDUFB1-1
Location (hg19): chr14:92524896-92525877
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 982 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000558190.1; RP11-529H20.5-001; OTTHUMT00000416808.1; NONHSAT039302
Alternative gene names: ENSG00000259634.1; RP11-529H20.5; OTTHUMG00000172095.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.282 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDUFB1-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATXN3-1:1
4.0 lnc-ATXN3-1:1
4.1 lnc-ATXN3-1:1
5.0 lnc-ATXN3-1:1
5.1 lnc-DICER1-29:9
5.2 lnc-NDUFB1-1:10